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Presentations for Session PHYLO III

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Order	Date/Time	Title	Section/Topic	Type	Authors	Keywords
Wednesday, July 27th 1:30 pm to 5:45 pm · Tubughnenq' 4/Dena'ina Center Session PHYLO III: Contributed Papers: Phylogenomics: Phylogenomics III
PHYLO III001	July 27th 1:30 pm	An updated phylogeny, biogeography, and PhyloCode-based classification of Cornaceae based on three sets of genomic data	Phylogenomics	Oral Paper	Xiang, Qiuyun (Jenny); Du, Zhiyuan; Cheng, Jing; Zhou, Wenbin; Wang, Qing-Feng; Soltis, Douglas; Soltis, Pamela.	phylogenomics RAD-Seq Angiosperms353 Hyb-Seq Cornaceae Classification Historical biogeography
PHYLO III002	July 27th 1:45 pm	Phylogenetic analysis of Perennial Endemic North American (PENA) Clade of Apiaceae	Phylogenomics	Oral Paper	Odufuwa, Phebian; Smith, James (Jim); Mansfield, Don; Feist, Mary Ann; Darrach, Mark.	phylogenetics species delimitation Generic boundaries delineation Angiosperms353 Geophyte Lomatium endemic flora
PHYLO III003	July 27th 2:00 pm	A Hyb-Seq phylogeny of Boechera (Brassicaceae) and related genera	Phylogenomics	Oral Paper	Hay, Nikolai; Bailey, C. Donovan; Mandakova, Terezie; Hendriks, Kasper; Pryer, Kathleen; Windham, Michael.	Boechera Hyb-Seq phylogenetics Brassicaceae
PHYLO III004	July 27th 2:15 pm	A phylogenomic baseline to study the evolution of extreme floral curvature in Centropogon subgenus Centropogon (Campanulaceae)	Phylogenomics	Oral Paper	Mansaray, Janet; Frost, Laura; Bedoya, Ana Maria; Lagomarsino, Laura.
PHYLO III005	July 27th 2:30 pm	Goldenrod herbariomics: Hybrid-sequence capture reveals the phylogeny of Solidago (Asteraceae)	Phylogenomics	Oral Paper	Beck, James; McMinn-Sauder, Harper; Stover, Melissa; Lemmon, Alan; Lemmon, Emily; Semple, John.	Anchored Hybrid Enrichment Chrysoma herbarium specimens North America Solidago phylogenomics Oligoneuron polyploidy
PHYLO III006	July 27th 2:45 pm	Integrating phylogenomic and cytological evidence for the allopolyploid origin of Drosera anglica (Droseraceae)	Phylogenomics	Oral Paper	Mohn, Rebekah; Yang, Ya.	polyploid transcriptome WGD carnivorous plant Caryophyllales
PHYLO III007	July 27th 3:00 pm	Dissecting pollinator-driven floral-trait evolution in Agave subg. Manfreda	Phylogenomics	Oral Paper	MacNeill, Bryan; McKain, Michael; Ruiz-Sanchez, Eduardo; Rodriguez Contreras, Aaron.
PHYLO III008	July 27th 3:15 pm	Break	Phylogenomics
PHYLO III009	July 27th 3:45 pm	A phylogeny of the evening primrose family (Onagraceae) with a focus on tribe Onagreae using a target enrichment approach	Phylogenomics	Oral Paper	Overson, Rick; Johnson, Matthew; Bechen, Lindsey; Kinosian, Sylvia; Douglas, Norman; Fant, Jeremie B; Hoch, Peter; Levin, Rachel; Moore, Michael; Raguso, Robert; Wagner, Warren; Skogen, Krissa; Wickett, Norman.	phylogenomics HybSeq Onagraceae evening primrose Target Enrichment systematics phylogenetics
PHYLO III010	July 27th 4:00 pm	A phylogenomic study of Scutellaria (Lamiaceae) based on chloroplast genomes and 272 nuclear single-copy genes	Phylogenomics	Oral Paper	Lee, Yoonkyung; Paton, Alan; Olmstead, Richard; Kim, Sangtae.	Scutellaria Lamiaceae Chlroplast genome Nuclear genome phylogenomics Hyb-Seq
PHYLO III011	July 27th 4:15 pm	Plastid phylogenomics of the Sansevieria Clade of Dracaena (Asparagaceae) resolves a recent radiation	Phylogenomics	Oral Paper	Larridon, Isabel; van Kleinwee, Iris; Shah, Toral; Bauters, Kenneth; Asselman, Pieter; Goetghebeur, Paul; Leliaert, Frederik; Veltjen, Emily.	biogeography convergent evolution dated phylogeny genome skimming succulent plants
PHYLO III012	July 27th 4:30 pm	Reference-free and bait-guided phylogenetic inference and species identification in the ginseng genus Panax (Araliaceae) using genome skim data	Phylogenomics	Oral Paper	Literman, Robert; Fairbanks, Regina; Liu, Jing; Liu, Bin-Bin; Nie, Zelong; Ren, Chen; Johnson, Gabriel; Wen, Jun; Zimmer, Elizabeth; Hunter, Elizabeth; Handy, Sara.	Panax ginseng baits genome skimming phylogeny species identification
PHYLO III013	July 27th 4:45 pm	Resolving the reticulate evolutionary history of the New Zealand polyploid-rich genus Azorella (Apiaceae)	Phylogenomics	Oral Paper	Ning, Weixuan; Meudt, Heidi; Nicolas, Antoine; Plunkett, Gregory; Lee, William; Tate, Jennifer.	Azorella Apiaceae hybridization Hyb-Seq whole-genome duplication phylogenomics Reticulation genome skimming
PHYLO III014	July 27th 5:00 pm	A First Plastome Phylogeny for Rumex L. (Polygonaceae), with Fossil-Aided Date Calibration	Phylogenomics	Oral Paper	Koenemann, Daniel Mark; Kistler, Logan; Burke, Janelle.	RAxML BEAST Fossil Calibration Cenozoic Plastomics
PHYLO III015	July 27th 5:15 pm	Rampant nuclear-mitochondrial-plastid phylogenomic discordance in globally distributed calcifying microalgae	Phylogenomics	Oral Paper	Kao, Tzu-Tong; Wang, Tzu-Haw; Ku, Chuan.	coccolithophore cytonuclear discordance heteroplasmy hybridization inter-organellar discordance organelle inheritance marine phytoplankton protist
PHYLO III016	July 27th 5:30 pm	Incorporating Phased Alleles to Reconstruct a Recent and Rapid Radiation in Schiedea (Caryophyllaceae)	Phylogenomics	Oral Paper	Loke, Elena; McDonnell, Angela; Moore, Michael; Sakai, Ann; Skogen, Krissa; Wagner, Warren; Weller, Stephen; Weisenberger, Lauren; Wickett, Norman.	Schiedea Hawaiian Islands HybSeq Target Enrichment Alleles Incomplete Lineage Sorting Carophyllaceae Radiation